Transcripts with only non specific oligonucleotides in the database


There is currently 360 transcripts without any specific oligonucleotides available in the database.
A "-" symbol means that no data was available from the original sequence file.


Gene Name
Function
Product
Locus_tag
cyoB_1
-
cytochrome o ubiquinol oxidase, subunit I-1
HDEF_0069
-
-
hypothetical protein
HDEF_0111
ssaI
-
type III secretion system apparatus protein
HDEF_0135
-
-
hypothetical protein
HDEF_0216
-
-
ISHde1, transposase orfB
HDEF_0237
-
-
ISHde1, transposase orfA
HDEF_0238
-
-
hypothetical protein
HDEF_0240
-
-
ISHde2, transposase orfA
HDEF_0251
-
-
ISHde2, transposase orfB
HDEF_0252
-
-
Mu-like prophage I protein
HDEF_0254
-
-
Mu-like phage F protein
HDEF_0257
-
-
putative PilV type IV pilus minor pilin subunit,
HDEF_0258
mobA_1
-
MobA relaxase/mobilization protein
HDEF_0263
hupA_1
-
HU, DNA-binding transcriptional regulator, alpha
HDEF_0264
-
-
ISHde1, transposase orfB
HDEF_0284
-
-
ISHde1, transposase orfA
HDEF_0285
-
-
group II intron encoded reverse transcriptase
HDEF_0297
-
-
group II intron encoded reverse transcriptase
HDEF_0351
-
-
hypothetical protein
HDEF_0394
-
-
hypothetical protein
HDEF_0395
-
-
ISHde1, transposase orfA
HDEF_0412
-
-
ISHde1, transposase orfB
HDEF_0413
-
-
conserved hypothetical protein
HDEF_0415
-
-
ISHde5, transposase orfB
HDEF_0434
-
-
group II intron encoded reverse transcriptase
HDEF_0441
-
-
hypothetical protein
HDEF_0464
-
-
hypothetical protein
HDEF_0470
-
-
hypothetical protein
HDEF_0496
-
-
hypothetical protein
HDEF_0501
-
-
hypothetical protein
HDEF_0507
-
-
group II intron encoded reverse transcriptase
HDEF_0540
-
-
conserved hypothetical phage protein
HDEF_0574
-
-
putative single-strand DNA-binding protein
HDEF_0575
-
-
group II intron encoded reverse transcriptase
HDEF_0582
-
-
ISHde1, transposase orfB
HDEF_0616
-
-
ISHde1, transposase orfA
HDEF_0617
-
-
group II intron encoded reverse transcriptase
HDEF_0619
-
-
group II intron encoded reverse transcriptase
HDEF_0723
-
-
group II intron encoded reverse transcriptase
HDEF_0726
trbC_1
-
TrbC conjugative transfer protein
HDEF_0727
finO_1
-
conjugal transfer fertility inhibition protein
HDEF_0728
-
-
conserved hypothetical protein
HDEF_0729
hupA_2
-
HU, DNA-binding transcriptional regulator, alpha
HDEF_0731
mobB_2
-
MobB relaxase/mobilization protein
HDEF_0733
mobC_2
-
MobC relaxase/mobilization protein
HDEF_0734
-
-
hypothetical protein
HDEF_0748
-
-
group II intron encoded reverse transcriptase
HDEF_0796
-
-
ISHde1, transposase orfB
HDEF_0836
-
-
ISHde1, transposase orfA
HDEF_0837
-
-
group II intron encoded reverse transcriptase
HDEF_0847
-
-
hypothetical protein
HDEF_0881
-
-
hypothetical protein
HDEF_0886
-
-
conserved hypothetical protein
HDEF_0892
-
-
phage tail collar domain protein
HDEF_0903
-
-
hypothetical protein
HDEF_0905
-
-
hypothetical protein
HDEF_0908
-
-
putative single-strand DNA-binding protein
HDEF_0919
-
-
conserved hypothetical phage protein
HDEF_0920
-
-
putative phage protein
HDEF_0924
-
-
ISHde4 transposase, orfB
HDEF_0925
-
-
ISHde4 transposase, orfA
HDEF_0926
-
-
putative resolvase
HDEF_0931
-
-
ISHde1, transposase orfB
HDEF_0935
-
-
ISHde1, transposase orfA
HDEF_0936
-
-
ISHde2, transposase orfA
HDEF_0939
-
-
ISHde2, transposase orfB
HDEF_0940
-
-
hypothetical protein
HDEF_0941
-
-
conserved hypothetical protein
HDEF_0944
-
-
conserved hypothetical protein
HDEF_0945
pilO_1
-
PilO type IV pilus biogenesis outer membrane
HDEF_0946
pilP_1
-
putative PilP type IV pilus biogenesis/secretion
HDEF_0947
pilQ_1
-
PilQ type IV pilus biogenesis protein ATPase
HDEF_0948
pilS2_1
-
PilS2 type IV pilus biosynthesis protein
HDEF_0950
pilV_1
-
PilV type IV pilus minor pilin subunit, shufflon
HDEF_0953
pilM_1
-
putative PilM type IV pilus biogenesis/secretion
HDEF_0954
-
-
conserved hypothetical protein
HDEF_0955
pilT_2
-
PilT lytic transglycosylase, SLT domain protein
HDEF_0956
traH_1
-
TraH conjugal transfer protein
HDEF_0957
traI_1
-
TraI conjugal transfer protein
HDEF_0958
traJ_1
-
TraJ conjugal transfer protein
HDEF_0959
-
-
addiction module, SpoVT/AbrB domain protein
HDEF_0961
traK_1
-
TraK conjugal transfer protein
HDEF_0962
traC_1
-
DNA primase TraC
HDEF_0963
traL
-
TraL conjugal transfer protein
HDEF_0965
traM_1
-
TraM conjugal transfer protein
HDEF_0966
traN
-
TraN conjugal transfer protein
HDEF_0967
traO
-
TraO conjugal transfer protein
HDEF_0968
-
-
hypothetical protein
HDEF_0969
traU
-
TraU conjugal transfer protein
HDEF_0970
traW
-
TraW conjugal transfer protein
HDEF_0971
traX
-
TraX conjugal transfer protein
HDEF_0972
trbA
-
TrbA conjugal transfer protein
HDEF_0978
trbB
-
TrbB conjugal transfer protein
HDEF_0979
trbC_2
-
TrbC conjugal transfer protein
HDEF_0980
-
-
group II intron encoded reverse transcriptase
HDEF_0981
-
-
group II intron encoded reverse transcriptase
HDEF_0982
-
-
group II intron encoded reverse transcriptase
HDEF_0983
-
-
group II intron encoded reverse transcriptase
HDEF_0992
-
-
hypothetical protein
HDEF_0995
-
-
ISHde1, transposase orfB
HDEF_1000
-
-
ISHde1, transposase orfA
HDEF_1001
-
-
phage holin
HDEF_1006
-
-
phage HNH endonuclease
HDEF_1011
-
-
ISHde2, transposase orfB
HDEF_1016
-
-
ISHde2, transposase orfA
HDEF_1017
repA_1
-
plasmid replication initiator protein
HDEF_1029
mobB_3
-
MobB relaxase/mobilization protein
HDEF_1031
queF_1
-
GTP cyclohydrolase I, copy 1
HDEF_1045
-
-
ISHde7 transposase orfB
HDEF_1052
-
-
ISHde7 transposase orfA
HDEF_1053
-
-
ISHde7 transposase orfA
HDEF_1054
-
-
ISHde7 transposase orfB
HDEF_1056
-
-
putative transcriptional regulator, PAS and GerE
HDEF_1073
-
-
phage protein
HDEF_1074
-
-
ISHde1, transposase orfB
HDEF_1079
-
-
ISHde1, transposase orfA
HDEF_1080
-
-
phage protein
HDEF_1089
-
-
conserved hypothetical
HDEF_1098
-
-
plasmid partition protein ParA-like protein
HDEF_1099
-
-
hypothetical protein
HDEF_1100
-
-
ISHde4 transposase, orfB
HDEF_1107
-
-
ISHde4 transposase, orfA
HDEF_1108
-
-
phage terminase, small subunit, P27 family
HDEF_1110
-
-
ISHde4 transposase, orfB
HDEF_1114
-
-
hypothetical protein
HDEF_1117
-
-
hypothetical protein
HDEF_1120
mpg_1
-
3-methyladenine DNA glycosylase
HDEF_1122
-
-
putative transcriptional regulator, GerE domain
HDEF_1132
-
-
putative transposase
HDEF_1136
-
-
conserved hypothetical protein
HDEF_1140
repA_3
-
plasmid replication initiator protein
HDEF_1141
-
-
putative transposase
HDEF_1150
-
-
ISHde3, transposase orfA
HDEF_1151
-
-
ISHde3, transposase orfB
HDEF_1152
-
-
group II intron encoded reverse transcriptase
HDEF_1156
rtxA_11
-
putative RTX-family protein-11
HDEF_1158
-
-
hypothetical protein
HDEF_1169
-
-
hypothetical protein
HDEF_1171
-
-
hypothetical protein
HDEF_1172
rtxA_14
-
putative RTX-family protein-14
HDEF_1186
-
-
putative transcriptional regulator, GerE domain
HDEF_1188
-
-
hypothetical protein
HDEF_1191
-
-
hypothetical protein
HDEF_1192
-
-
hypothetical protein
HDEF_1195
-
-
hypothetical protein
HDEF_1197
-
-
hypothetical protein
HDEF_1198
-
-
group II intron encoded reverse transcriptase
HDEF_1223
pilQ_2
-
PilQ type IV pilus biogenesis protein ATPase,
HDEF_1224
ibpB
-
small heat shock protein
HDEF_1226
pilT_3
-
PilT lytic transglycosylase, SLT domain protein
HDEF_1230
-
-
ISHde4 transposase, orfA
HDEF_1235
-
-
ISHde4 transposase, orfB
HDEF_1236
-
-
ISHde2, transposase orfB
HDEF_1240
-
-
ISHde2, transposase orfA
HDEF_1241
-
-
hypothetical protein
HDEF_1245
-
-
group II intron encoded reverse transcriptase
HDEF_1251
-
-
hypothetical protein
HDEF_1264
-
-
hypothetical protein
HDEF_1265
-
-
type V secretory pathway, adhesin
HDEF_1294
-
-
ISHde1, transposase orfB
HDEF_1295
-
-
ISHde1, transposase orfA
HDEF_1296
-
-
hypothetical protein
HDEF_1299
-
-
putative outer membrane autotransporter, barrel
HDEF_1300
mpg_2
-
3-methyladenine DNA glycosylase
HDEF_1323
-
-
hypothetical protein
HDEF_1326
-
-
hypothetical protein
HDEF_1327
-
-
ISHde1, transposase orfA
HDEF_1344
-
-
ISHde1, transposase orfB
HDEF_1345
-
-
hypothetical protein
HDEF_1356
-
-
hypothetical protein
HDEF_1361
-
-
addiction module toxin
HDEF_1366
-
-
addiction module antitoxin
HDEF_1367
-
-
hypothetical protein
HDEF_1369
-
-
conserved hypothetical phage protein
HDEF_1370
-
-
ISHde1, transposase orfB
HDEF_1371
-
-
ISHde1, transposase orfA
HDEF_1372
-
-
conserved hypothetical protein
HDEF_1373
-
-
group II intron encoded reverse transcriptase
HDEF_1375
-
-
hypothetical protein
HDEF_1380
-
-
putative transposase
HDEF_1381
mutL_2
-
enzyme in methyl-directed mismatch repair
HDEF_1386
msrB_1
-
methionine sulfoxide reductase
HDEF_1400
rtxA_19
-
putative RTX-family protein-19
HDEF_1404
mobB_4
-
MobB relaxase/mobilization protein
HDEF_1407
hu
-
DNA-binding protein HU-alpha (HU-2)
HDEF_1409
-
-
putative transposase
HDEF_1412
finO_2
-
conjugal transfer fertility inhibition protein
HDEF_1413
trbC_3
-
TrbC conjugal transfer protein
HDEF_1414
-
-
group II intron encoded reverse transcriptase
HDEF_1415
traK_2
-
TraK conjugal transfer protein
HDEF_1417
traJ_2
-
TraJ conjugal transfer protein
HDEF_1418
traI_2
-
TraI conjugal transfer protein
HDEF_1419
traH_2
-
TraH conjugal transfer protein
HDEF_1420
pilT_4
-
PilT lytic transglycosylase, SLT domain protein
HDEF_1421
-
-
putative type IV pilus leader peptidase
HDEF_1422
pilM_3
-
PilM type IV pilus biogenesis protein
HDEF_1423
pilV_3
-
PilV type IV pilus minor pilin subunit, shufflon
HDEF_1424
pilS2_2
-
PilS2 type IV pilus biosynthesis protein
HDEF_1425
pilO_3
-
PilO type IV pilus biogenesis outer membrane
HDEF_1429
pilL_2
-
PilL type IV pilus biogenesis protein
HDEF_1433
-
-
putative NusG-type transcription antiterminator
HDEF_1435
-
-
ISHde1, transposase orfB
HDEF_1437
-
-
ISHde1, transposase orfA
HDEF_1438
-
-
ISHde1, transposase orfA
HDEF_1443
-
-
ISHde1, transposase orfB
HDEF_1444
-
-
conserved hypothetical phage protein
HDEF_1451
-
-
conserved hypothetical protein
HDEF_1460
-
-
ISHde1, transposase orfB
HDEF_1461
-
-
ISHde1, transposase orfA
HDEF_1462
-
-
hypothetical protein
HDEF_1467
-
-
conserved hypothetical protein
HDEF_1468
-
-
putative transposase
HDEF_1478
degP_1
-
serine endoprotease (protease Do),
HDEF_1479
proQ_1
-
predicted structural transport element
HDEF_1480
prc_1
-
carboxy-terminal protease for penicillin-binding
HDEF_1481
htpX_1
-
heat shock protein, integral membrane protein
HDEF_1482
amiD_1
-
predicted amidase and lipoprotein
HDEF_1483
amiD_2
-
predicted amidase and lipoprotein
HDEF_1484
htpX_2
-
heat shock protein, integral membrane protein
HDEF_1485
prc_2
-
carboxy-terminal protease for penicillin-binding
HDEF_1486
proQ_2
-
predicted structural transport element
HDEF_1487
-
-
hypothetical protein
HDEF_1504
-
-
hypothetical protein
HDEF_1523
-
-
hypothetical protein
HDEF_1534
-
-
hypothetical protein
HDEF_1535
-
-
hypothetical protein
HDEF_1537
-
-
hypothetical protein
HDEF_1552
-
-
hypothetical protein
HDEF_1555
-
-
putative transposase
HDEF_1556
-
-
putative IS4-like transposase
HDEF_1558
-
-
ISHde3, transposase orfA
HDEF_1570
-
-
conserved hypothetical protein
HDEF_1573
-
-
hypothetical protein
HDEF_1574
-
-
hypothetical protein
HDEF_1576
-
-
conserved hypothetical phage protein
HDEF_1577
-
-
conserved hypothetical / Antirepressor
HDEF_1580
-
-
hypothetical protein
HDEF_1581
-
-
phage integrase
HDEF_1582
-
-
phage anti-repressor protein
HDEF_1584
-
-
putative phage antirepressor
HDEF_1585
-
-
hypothetical protein
HDEF_1586
-
-
phage anti-repressor protein
HDEF_1587
-
-
hypothetical protein
HDEF_1588
-
-
SNase-like micrococcal nuclease
HDEF_1589
-
-
hypothetical protein
HDEF_1590
P16
-
APSE-2 prophage; conserved hypothetical protein
HDEF_1677
-
-
ISHde1, transposase orfB
HDEF_1706
-
-
ISHde1, transposase orfA
HDEF_1707
-
-
phage integrase
HDEF_1710
ftsB
-
cell division protein
HDEF_1716
-
-
hypothetical protein
HDEF_1761
-
-
ISHde1, transposase orfA
HDEF_1902
-
-
ISHde1, transposase orfB
HDEF_1903
rpmB
-
50S ribosomal subunit protein L28
HDEF_1914
-
-
ISHde1, transposase orfA
HDEF_1934
-
-
ISHde1, transposase orfB
HDEF_1935
-
-
group II intron encoded reverse transcriptase
HDEF_1937
-
-
hypothetical protein
HDEF_1976
-
-
conserved hypothetical phage protein
HDEF_1977
-
-
hypothetical protein
HDEF_1978
-
-
phage-related exonuclease
HDEF_1981
-
-
ISHde2, transposase orfA
HDEF_1983
-
-
ISHde2, transposase orfB
HDEF_1984
-
-
hypothetical protein
HDEF_1987
cyoB_2
-
cytochrome o ubiquinol oxidase, subunit I -2
HDEF_1996
-
-
putative IS4-like transposase
HDEF_1998
-
-
group II intron encoded reverse transcriptase
HDEF_2000
-
-
group II intron encoded reverse transcriptase
HDEF_2001
-
-
group II intron encoded reverse transcriptase
HDEF_2002
-
-
group II intron encoded reverse transcriptase
HDEF_2022
-
-
group II intron encoded reverse transcriptase
HDEF_2023
-
-
group II intron encoded reverse transcriptase
HDEF_2024
-
-
hypothetical protein
HDEF_2046
-
-
ISHde1, transposase orfB
HDEF_2049
-
-
ISHde1, transposase orfA
HDEF_2050
-
-
phage anti-repressor protein
HDEF_2052
-
-
putative phage antirepressor
HDEF_2053
-
-
hypothetical protein
HDEF_2054
-
-
phage anti-repressor protein
HDEF_2055
-
-
hypothetical protein
HDEF_2056
-
-
SNase-like micrococcal nuclease
HDEF_2057
-
-
ISHde6, transposase orfA
HDEF_2138
-
-
ISHde6, transposase orfB
HDEF_2139
-
-
ISHde2, transposase orfB
HDEF_2140
-
-
ISHde2, transposase orfA
HDEF_2141
-
-
addiction module, PIN domain protein
HDEF_2149
-
-
inversion of adjacent DNA
HDEF_2151
-
-
ISHde7, transposase orfA
HDEF_2153
-
-
ISHde7, transposase orfB
HDEF_2154
-
-
addiction module antitoxin
HDEF_2158
-
-
addiction module toxin
HDEF_2159
-
-
hypothetical protein
HDEF_2170
-
-
hypothetical protein
HDEF_2172
-
-
plasmid partition protein ParA-like protein
HDEF_2176
-
-
conserved hypothetical protein
HDEF_2177
mobB_5
-
MobB relaxase/mobilization protein
HDEF_2179
-
-
ISHde1, transposase orfB
HDEF_2181
-
-
ISHde1, transposase orfA
HDEF_2182
-
-
conserved hypothetical protein
HDEF_2185
-
-
putative phage tail fiber protein
HDEF_2187
-
-
ISHde1, transposase orfB
HDEF_2188
-
-
ISHde1, transposase orfA
HDEF_2189
-
-
conserved hypothetical protein
HDEF_2192
-
-
putative phage tail fiber protein
HDEF_2194
-
-
ISHde1, transposase orfB
HDEF_2195
-
-
ISHde1, transposase orfA
HDEF_2196
-
-
conserved hypothetical protein
HDEF_2199
-
-
putative phage tail fiber protein
HDEF_2201
-
-
ISHde1, transposase orfB
HDEF_2202
-
-
ISHde1, transposase orfA
HDEF_2203
-
-
hypothetical protein
HDEF_2223
-
-
putative transcriptional regulator, GerE domain
HDEF_2229
msrB_2
-
methionine sulfoxide reductase
HDEF_2232
-
-
conserved hypothetical protein
HDEF_2235
-
-
ISHde1, transposase orfA
HDEF_2241
-
-
ISHde1, transposase orfB
HDEF_2242
-
-
hypothetical protein
HDEF_2243
-
-
hypothetical protein
HDEF_2257
-
-
hypothetical protein
HDEF_2259
-
-
hypothetical protein
HDEF_2279
-
-
ISHde3, transposase orfA
HDEF_2280
-
-
ISHde3, transposase orfB
HDEF_2282
-
-
hypothetical protein
HDEF_2284
-
-
hypothetical protein
HDEF_2285
-
-
putative transcriptional regulator, PAS and GerE
HDEF_2313
-
-
group II intron encoded reverse transcriptase
HDEF_2321
repA
-
plasmid replication initiator protein
HDEF_p0001
-
-
putative transcriptional regulator, PAS domain
HDEF_p0004
mutL
-
enzyme in methyl-directed mismatch repair
HDEF_p0005
-
-
putative resolvase HDEF_p0007
HDEF_p0007
-
-
putative addiction module, PIN domain protein
HDEF_p0008
-
-
conserved hypothetical protein HDEF_p0010
HDEF_p0010
mobB
-
MobB relaxase/mobilization protein
HDEF_p0012
mobA
-
MobA relaxase/mobilization protein
HDEF_p0013
hu
-
DNA-binding protein
HDEF_p0014
trbC
-
TrbC conjugal transfer protein
HDEF_p0016
-
-
group II intron encoded reverse transcriptase
HDEF_p0017
trbB
-
TrbB conjugal transfer protein
HDEF_p0018
trbA
-
TrbA conjugal transfer protein
HDEF_p0019
traX
-
TraX conjugal transfer protein
HDEF_p0024
traW
-
TraW conjugal transfer protein
HDEF_p0025
traU
-
TraU conjugal transfer protein
HDEF_p0027
traO
-
TraO conjugal transfer protein
HDEF_p0033
traN
-
TraN conjugal transfer protein
HDEF_p0034
traM
-
TraM conjugal transfer protein
HDEF_p0035
traL
-
TraL conjugal transfer protein
HDEF_p0036
traK
-
TraK conjugal transfer protein
HDEF_p0038
traJ
-
TraJ conjugal transfer protein
HDEF_p0039
traI
-
TraI conjugal transfer protein
HDEF_p0041
traH
-
TraH conjugal transfer protein
HDEF_p0040
pilT
-
PilT lytic transglycosylase, SLT domain protein
HDEF_p0042
-
-
conserved hypothetical protein HDEF_p0043
HDEF_p0043
pilM
-
PilM type IV pilus biogenesis protein
HDEF_p0044
pilV
-
PilV type IV pilus minor pilin subunit, shufflon
HDEF_p0045
pilR
-
PilR type IV pilus biosynthesis protein
HDEF_p0047
pilQ
-
PilQ type IV pilus biogenesis protein ATPase
HDEF_p0048
pilP
-
putative type IV pilus protein
HDEF_p0049
-
-
conserved hypothetical protein HDEF_p0051
HDEF_p0051
-
-
conserved hypothetical protein HDEF_p0052
HDEF_p0052
rfaH
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transcriptional activator affecting
HDEF_p0055